# List of top-scoring protein chains for t06-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2igd	61	1.35e-10		
2qmtA	56	1.51e-10		
2on8A	56	1.70e-10		
2igdA	61	1.88e-10	d.15.7.1	37821
2gi9A	56	2.31e-10		
2b7eA	59	1.569		
1vf8A	377	12.47	c.1.8.5,d.26.3.1	120029,120030
1iktA	120	18.50	d.106.1.1	66188
2qklA	127	20.33		
1uwcA	261	23.82	c.69.1.17	100101
2dk5A	91	25.38		
3cz6A	168	33.83		
1krnA	88	38.47	g.14.1.1	44629
1vkwA	218	39.80	d.90.1.2	108695
1fioA	196	46.20	a.47.2.1	17773
1hz6A	72	50.37	d.15.7.1	61429
3cjsA	60	50.74		
5hpgA	84	52.31	g.14.1.1	44642
1eeuA	114	55.41	b.1.1.1	20546
2hz5A	106	63.64		
2jt1A	77	63.90		
2qsbA	89	66.59		
2qgmA	445	68.06		
2h6fB	437	71.40	a.102.4.3	136186
2v05A	311	71.88		
1i71A	83	73.10	g.14.1.1	61864
2qzgA	94	73.66		
2f6eA	127	75.99		
2cruA	118	76.42	a.5.6.1	130742
2bnuA	203	79.52		
1ptf	88	80.61		
2fm9A	215	82.45	a.257.1.1	133770
1p49A	562	83.49	c.76.1.2	94089
2ifxA	114	86.85		
2q00A	129	86.90		
3bs3A	76	87.16