# List of top-scoring protein chains for t06-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2igd	61	1.69e-10		
2qmtA	56	1.90e-10		
2on8A	56	2.03e-10		
2igdA	61	2.38e-10	d.15.7.1	37821
2gi9A	56	2.57e-10		
2b7eA	59	1.740		
1vf8A	377	10.29	c.1.8.5,d.26.3.1	120029,120030
2qklA	127	19.84		
2dk5A	91	24.22		
1uwcA	261	27.07	c.69.1.17	100101
1iktA	120	31.07	d.106.1.1	66188
3cz6A	168	31.44		
1fioA	196	40.71	a.47.2.1	17773
1krnA	88	43.83	g.14.1.1	44629
1vkwA	218	52.30	d.90.1.2	108695
5hpgA	84	55.68	g.14.1.1	44642
1eeuA	114	60.10	b.1.1.1	20546
2qsbA	89	61.61		
1hz6A	72	63.30	d.15.7.1	61429
3cjsA	60	65.60		
2hz5A	106	66.38		
1ptf	88	70.74		
2v05A	311	71.06		
2f6eA	127	72.78		
2h6fB	437	77.59	a.102.4.3	136186
2qzgA	94	80.16		
1ptfA	88	80.80	d.94.1.1	40549
2bnuA	203	81.46		
1p49A	562	81.60	c.76.1.2	94089
2cruA	118	81.65	a.5.6.1	130742
1i71A	83	82.33	g.14.1.1	61864
2fm9A	215	82.50	a.257.1.1	133770
2jt1A	77	82.55		
1wviA	257	84.92	c.108.1.14	114915
2qgmA	445	84.96