# List of top-scoring protein chains for t06-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2igd	61	6.83e-12		
2on8A	56	7.48e-12		
2igdA	61	8.54e-12	d.15.7.1	37821
2qmtA	56	9.09e-12		
2gi9A	56	1.05e-11		
2b7eA	59	3.051		
1vf8A	377	6.354	c.1.8.5,d.26.3.1	120029,120030
3cz6A	168	20.10		
1iktA	120	30.06	d.106.1.1	66188
3cjsA	60	31.65		
1uwcA	261	36.96	c.69.1.17	100101
2q00A	129	37.22		
1fioA	196	41.90	a.47.2.1	17773
1krnA	88	44.62	g.14.1.1	44629
1ql3A	99	46.06	a.3.1.1	15822
12asA	330	46.09	d.104.1.1	40783
5hpgA	84	51.45	g.14.1.1	44642
2qklA	127	54.08		
1eeuA	114	55.69	b.1.1.1	20546
1ic6A	279	59.82	c.41.1.1	62257
2dk5A	91	66.63		
2v05A	311	68.21		
2f6eA	127	70.53		
2h6fB	437	79.83	a.102.4.3	136186
1p49A	562	80.39	c.76.1.2	94089
1i71A	83	83.25	g.14.1.1	61864
1x2gA	337	86.10