# List of top-scoring protein chains for t06-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2igd	61	4.15e-10		
2igdA	61	5.18e-10	d.15.7.1	37821
2qmtA	56	5.56e-10		
2gi9A	56	6.58e-10		
2on8A	56	6.85e-10		
2b7eA	59	5.481		
2qklA	127	15.65		
2d4rA	147	21.45	d.129.3.6	131256
2h6fB	437	25.23	a.102.4.3	136186
1e25A	282	32.54	e.3.1.1	42731
2ov5A	261	33.06		
2gdnA	267	42.22		
1c44A	123	43.99	d.106.1.1	40795
1tn6B	437	46.10	a.102.4.3	112528
2qsbA	89	48.93		
2i6cA	160	49.96	d.108.1.1	137095
1wn1A	356	57.41		
1n9bA	265	57.49	e.3.1.1	85463
2qzgA	94	60.65		
1wchA	315	61.87	c.45.1.2	114508
1q67A	231	62.47	b.55.1.7	95960
1uwcA	261	65.08	c.69.1.17	100101
3cjsA	60	65.82		
3bs3A	76	73.74		
1z3xA	238	76.44	a.118.1.22,a.261.1.1	124416,124417
1wfxA	186	77.29	d.166.1.5	114596
2ahnA	222	81.63		
3cz6A	168	82.75		
1g6aA	271	85.22	e.3.1.1	42704