Best Alignments for T0498

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2igdA	3.8018e-14	2igdA/T0498-2igdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.15.7.1
2igd	5.8341e-14	2igd/T0498-2igd-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qmtA	6.0216e-14	2qmtA/T0498-2qmtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2on8A	1.2142e-13	2on8A/T0498-2on8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gi9A	1.9644e-13	2gi9A/T0498-2gi9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b7eA	2.5579e+00	2b7eA/T0498-2b7eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cvrA	1.2175e+01	1cvrA/T0498-1cvrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.18.12 c.17.1.2
2qklA	6.2782e+01	2qklA/T0498-2qklA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vf8A	6.9796e+01	1vf8A/T0498-1vf8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.8.5 d.26.3.1
3cjsA	7.0476e+01	3cjsA/T0498-3cjsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1e9lA	7.2882e+01	1e9lA/T0498-1e9lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.8.5 d.26.3.1
1y4oA	7.7629e+01	1y4oA/T0498-1y4oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f15A	7.9558e+01	2f15A/T0498-2f15A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uwdA	7.9845e+01	1uwdA/T0498-1uwdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.52.8.2
1ehxA	8.2981e+01	1ehxA/T0498-1ehxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i7hA	8.5535e+01	2i7hA/T0498-2i7hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ql3A	8.6972e+01	1ql3A/T0498-1ql3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.3.1.1
2joeA	8.6986e+01	2joeA/T0498-2joeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uzcA	8.7003e+01	1uzcA/T0498-1uzcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1x2gA	8.7621e+01	1x2gA/T0498-1x2gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001