# List of top-scoring protein chains for t04-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2on8A	56	6.69e-12		
2igdA	61	7.60e-12	d.15.7.1	37821
2qmtA	56	8.11e-12		
2igd	61	9.34e-12		
2gi9A	56	9.38e-12		
2b7eA	59	3.059		
1cvrA	435	4.073	b.1.18.12,c.17.1.2	21949,31006
1v2yA	105	33.29	d.15.1.1	100275
3cjsA	60	33.59		
1vf8A	377	37.30	c.1.8.5,d.26.3.1	120029,120030
1e9lA	377	43.56	c.1.8.5,d.26.3.1	59395,59396
2f15A	96	43.70		
1ql3A	99	44.52	a.3.1.1	15822
1z0mA	96	48.40		
2q00A	129	49.98		
1y4oA	104	50.97		
1z0nA	96	54.20		
2qklA	127	58.69		
1qn2A	100	61.21	a.3.1.1	15882
1krnA	88	65.19	g.14.1.1	44629
1i71A	83	68.11	g.14.1.1	61864
2f6eA	127	75.29		
1sc3A	178	78.58	c.17.1.1	105416
1hz6A	72	81.08	d.15.7.1	61429
1x2gA	337	81.58		
1nl1A	147	81.83	g.14.1.1,g.32.1.1	91949,91950
1zoxA	113	82.08		
2a1xA	308	86.64	b.82.2.9	126022
5hpgA	84	89.46	g.14.1.1	44642