# List of top-scoring protein chains for t04-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2igdA	61	6.81e-08	d.15.7.1	37821
2igd	61	7.78e-08		
2gi9A	56	8.05e-08		
2on8A	56	8.33e-08		
2qmtA	56	8.72e-08		
1cvrA	435	7.932	b.1.18.12,c.17.1.2	21949,31006
2b7eA	59	16.79		
1v0jA	399	42.10		
2qsbA	89	50.79		
2qklA	127	57.40		
1q67A	231	75.45	b.55.1.7	95960
3bs3A	76	75.55		
1q1uA	144	79.10	b.42.1.1	95608
2qzgA	94	85.56		
2d4rA	147	87.45	d.129.3.6	131256