Best Alignments for T0496

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2f9iB	4.1581e+01	2f9iB/T0496-2f9iB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2csoA	4.8770e+01	2csoA/T0496-2csoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gp8A	7.1744e+01	1gp8A/T0496-1gp8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	j.58.1.1
1p0zA	7.2599e+01	1p0zA/T0496-1p0zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.6.1
1auk	7.6729e+01	1auk/T0496-1auk-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bh0A	7.9994e+01	1bh0A/T0496-1bh0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ei6A	8.1770e+01	1ei6A/T0496-1ei6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.76.1.4
3bqoA	8.2690e+01	3bqoA/T0496-3bqoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2d4qA	8.3236e+01	2d4qA/T0496-2d4qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i9cA	8.6259e+01	2i9cA/T0496-2i9cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bh0	8.6654e+01	1bh0/T0496-1bh0-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ar1A	8.6687e+01	2ar1A/T0496-2ar1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sb8A	8.6780e+01	1sb8A/T0496-1sb8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.2
1fi4A	8.8740e+01	1fi4A/T0496-1fi4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cozA	8.9447e+01	1cozA/T0496-1cozA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.1.2
2gsoA	9.2486e+01	2gsoA/T0496-2gsoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pvqA	9.4496e+01	2pvqA/T0496-2pvqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1p49A	9.5331e+01	1p49A/T0496-1p49A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.76.1.2
1zotA	9.6281e+01	1zotA/T0496-1zotA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ixsA	9.7166e+01	1ixsA/T0496-1ixsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001