Best Alignments for T0496

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2uv3A	2.0745e+01	2uv3A/T0496-2uv3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2csoA	2.2643e+01	2csoA/T0496-2csoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fshA	2.2960e+01	1fshA/T0496-1fshA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gp8A	2.3963e+01	2gp8A/T0496-2gp8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	j.58.1.1
1uhwA	3.4898e+01	1uhwA/T0496-1uhwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wn0A	3.5121e+01	1wn0A/T0496-1wn0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.24.10.2
1reqB	3.9185e+01	1reqB/T0496-1reqB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zjaA	4.0050e+01	1zjaA/T0496-1zjaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2a0bA	4.7835e+01	2a0bA/T0496-2a0bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.24.10.1
1l1yA	4.9242e+01	1l1yA/T0496-1l1yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1etxA	5.0303e+01	1etxA/T0496-1etxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.12
1dt9A	5.0975e+01	1dt9A/T0496-1dt9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1v3fA	5.1657e+01	1v3fA/T0496-1v3fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2chcA	5.4777e+01	2chcA/T0496-2chcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1oj4A	5.5157e+01	1oj4A/T0496-1oj4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2arcA	5.6222e+01	2arcA/T0496-2arcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vlpA	5.7400e+01	1vlpA/T0496-1vlpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uokA	5.9008e+01	1uokA/T0496-1uokA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yirA	6.2777e+01	1yirA/T0496-1yirA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vduB	6.2960e+01	2vduB/T0496-2vduB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001