# List of top-scoring protein chains for t2k-w0.5-1-o_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1etxA	98	6.715	a.4.1.12	18978
2gp8A	40	8.015	j.58.1.1	46343
2uv3A	126	9.106		
1wn0A	145	22.36	a.24.10.2	121070
2vduB	450	24.07		
3c10A	423	26.51		
2ouaA	188	27.64		
2pqpA	421	29.43		
2p6pA	384	33.65		
1npmA	225	35.49	b.47.1.2	26070
2a0bA	125	41.02	a.24.10.1	16630
2nvrA	423	42.56		
1liiA	363	46.64	c.72.1.1	73921
1oktA	211	50.68	a.45.1.1,c.47.1.5	93272,93273
1fuiA	591	57.14	b.43.2.1,c.85.1.1	25674,35444
1umuA	116	59.56	b.87.1.1	28382
1geqA	248	66.01	c.1.2.4	28589
2bdgA	223	72.89		
2ea3A	189	73.64		
2bkwA	385	76.13	c.67.1.3	128714
2bmzA	141	79.56		
2ptzA	432	82.40		
1csp	67	82.53		
2htiA	185	84.61	b.45.1.1	136744
1neuA	124	85.50	b.1.1.1	19704
1k38A	254	87.23	e.3.1.1	84303