# List of top-scoring protein chains for t2k-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2uv3A	126	7.444		
1etxA	98	8.782	a.4.1.12	18978
2gp8A	40	10.09	j.58.1.1	46343
2vduB	450	19.49		
1wn0A	145	19.67	a.24.10.2	121070
2ouaA	188	24.37		
1npmA	225	26.33	b.47.1.2	26070
2a0bA	125	33.28	a.24.10.1	16630
1oktA	211	35.04	a.45.1.1,c.47.1.5	93272,93273
2p6pA	384	40.88		
3c10A	423	45.05		
2pqpA	421	46.35		
2ea3A	189	47.46		
2ptzA	432	48.97		
2bdgA	223	58.25		
1geqA	248	65.81	c.1.2.4	28589
2nvrA	423	67.30		
1fuiA	591	71.36	b.43.2.1,c.85.1.1	25674,35444
1umuA	116	73.74	b.87.1.1	28382
1a5fL	220	79.28	b.1.1.1,b.1.1.2	20302,21294
2bkwA	385	80.99	c.67.1.3	128714
1a1uA	35	81.81	a.53.1.1	17863
1kczA	413	83.27	c.1.11.2,d.54.1.1	68451,68452
1aac	105	88.03