# List of top-scoring protein chains for t2k-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2uv3A	126	10.75		
2gp8A	40	11.35	j.58.1.1	46343
1etxA	98	11.85	a.4.1.12	18978
1wn0A	145	18.61	a.24.10.2	121070
2vduB	450	26.40		
1npmA	225	35.23	b.47.1.2	26070
2a0bA	125	38.52	a.24.10.1	16630
2ouaA	188	40.61		
2ptzA	432	41.19		
3c10A	423	42.02		
2pqpA	421	46.13		
2ea3A	189	49.66		
2p6pA	384	57.35		
1kczA	413	57.53	c.1.11.2,d.54.1.1	68451,68452
2nvrA	423	62.53		
1umuA	116	64.58	b.87.1.1	28382
1geqA	248	65.84	c.1.2.4	28589
1csp	67	68.61		
2pa6A	427	69.19		
1oktA	211	73.39	a.45.1.1,c.47.1.5	93272,93273
1fuiA	591	73.99	b.43.2.1,c.85.1.1	25674,35444
2bdgA	223	79.23		
1a1uA	35	83.80	a.53.1.1	17863
1sfcD	87	87.44	h.1.15.1	45646