# List of top-scoring protein chains for t2k-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2gp8A	40	17.34	j.58.1.1	46343
2uv3A	126	20.68		
2a0bA	125	30.72	a.24.10.1	16630
1etxA	98	31.51	a.4.1.12	18978
2vduB	450	32.58		
3c10A	423	35.11		
1wn0A	145	35.43	a.24.10.2	121070
1fuiA	591	35.80	b.43.2.1,c.85.1.1	25674,35444
2pqpA	421	39.59		
2ptzA	432	50.85		
2gd5A	179	57.56		
1ou8A	111	58.02	b.136.1.1	93543
1npmA	225	60.84	b.47.1.2	26070
1liiA	363	63.95	c.72.1.1	73921
1oktA	211	64.94	a.45.1.1,c.47.1.5	93272,93273
1br2A	791	65.37	b.34.3.1,c.37.1.9	24558,32155
2p6pA	384	71.87		
2pa6A	427	71.96		
2nvrA	423	73.36		
2yz1A	120	73.88		
1umuA	116	75.00	b.87.1.1	28382
1geqA	248	75.56	c.1.2.4	28589
2g0wA	296	75.77	c.1.15.4	134503
1pd21	199	76.30		
1csp	67	80.98		
2hq9A	149	81.46	b.45.1.1	136659
1qtyT	101	83.56	b.1.1.4	21769
2a0b	125	86.18		
2ouaA	188	86.83