# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2gp8A	40	10.79	j.58.1.1	46343
1wn0A	145	20.44	a.24.10.2	121070
1etxA	98	20.61	a.4.1.12	18978
2vduB	450	21.70		
2uv3A	126	22.94		
1fuiA	591	26.63	b.43.2.1,c.85.1.1	25674,35444
3c10A	423	38.88		
2a0bA	125	43.21	a.24.10.1	16630
2pqpA	421	50.63		
2p6pA	384	52.50		
2nvrA	423	57.13		
1umuA	116	61.20	b.87.1.1	28382
2ouaA	188	62.51		
1kczA	413	70.47	c.1.11.2,d.54.1.1	68451,68452
1sr4C	166	73.29	b.42.2.1	105950
1liiA	363	75.53	c.72.1.1	73921
2g0wA	296	76.44	c.1.15.4	134503
1sfcD	87	81.79	h.1.15.1	45646
1jthA	82	84.38	h.1.15.1	67270
1oktA	211	89.90	a.45.1.1,c.47.1.5	93272,93273