# List of top-scoring protein chains for t2k-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2gp8A	40	5.552	j.58.1.1	46343
1etxA	98	13.60	a.4.1.12	18978
2uv3A	126	15.32		
2yz1A	120	17.46		
2a0bA	125	21.18	a.24.10.1	16630
2vduB	450	23.38		
1wn0A	145	25.03	a.24.10.2	121070
1fuiA	591	37.24	b.43.2.1,c.85.1.1	25674,35444
2p6pA	384	42.91		
1oktA	211	47.26	a.45.1.1,c.47.1.5	93272,93273
1csp	67	54.29		
2g0wA	296	54.46	c.1.15.4	134503
1npmA	225	55.38	b.47.1.2	26070
1vcoA	550	61.34	c.23.16.1,c.37.1.10	108508,108509
2gd5A	179	61.45		
3c10A	423	62.71		
1avqA	228	63.84	c.52.1.13	33326
1a1uA	35	72.71	a.53.1.1	17863
1zbdB	134	74.13	g.50.1.1	45359
1kczA	413	74.84	c.1.11.2,d.54.1.1	68451,68452
2ouaA	188	75.70		
1gp8A	40	77.23	j.58.1.1	46342
1geqA	248	77.25	c.1.2.4	28589
1pd21	199	77.58		
2pqpA	421	79.12		
1jthA	82	79.69	h.1.15.1	67270
2bmzA	141	81.12		
1umuA	116	83.08	b.87.1.1	28382
2dj0A	137	88.83