# List of top-scoring protein chains for t2k-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1wn0A	145	5.180	a.24.10.2	121070
2i24N	121	9.97		
2a0bA	125	12.90	a.24.10.1	16630
2gp8A	40	15.37	j.58.1.1	46343
2coqA	108	15.69		
2ov8A	288	16.85		
2j59M	168	19.96		
2rffA	111	20.02		
1sq2N	113	21.11	b.1.1.1	105881
1voqa	90	22.77		
2cavA	445	29.80	b.82.1.2,b.82.1.2	28094,28095
1hlb	158	32.99		
2ouaA	188	33.94		
1ic7H	114	35.64	b.1.1.1	62258
2af6A	258	37.46		
1qqeA	292	41.44	a.118.8.1	19210
2q4nA	166	47.20	b.60.1.8	139871
2aalA	131	49.07	d.80.1.6	126483
1geqA	248	51.98	c.1.2.4	28589
1csp	67	52.91		
2q4fA	149	53.35	a.24.10.2	139847
1i8kB	124	53.77	b.1.1.1	71131
1u9kA	114	55.92	b.1.1.1	113244
2pg4A	95	57.30		
1um5H	217	63.10	b.1.1.1,b.1.1.2	113302,113303
1pd21	199	63.30		
1sfcD	87	64.92	h.1.15.1	45646
1n4xH	120	66.36	b.1.1.1	85324
1dqtA	117	67.59	b.1.1.1	20653
2a0b	125	70.63		
1g6wA	261	78.76	a.45.1.1,c.47.1.5	17751,33045
1j1xH	114	80.30	b.1.1.1	77063
1maiA	131	80.32	b.55.1.1	26951
1dugA	234	82.06	a.45.1.1,c.47.1.5	17718,33012
1kxvC	121	87.78	b.1.1.1	73190