Best Alignments for T0496

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2f9iB	1.4404e+01	2f9iB/T0496-2f9iB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sb8A	4.1516e+01	1sb8A/T0496-1sb8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.2
1ei6A	4.1661e+01	1ei6A/T0496-1ei6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.76.1.4
1auk	4.1850e+01	1auk/T0496-1auk-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cozA	4.4175e+01	1cozA/T0496-1cozA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.1.2
1p0zA	4.5953e+01	1p0zA/T0496-1p0zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.6.1
1bvoA	6.1144e+01	1bvoA/T0496-1bvoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bqoA	6.1855e+01	3bqoA/T0496-3bqoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gp8A	6.2439e+01	1gp8A/T0496-1gp8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	j.58.1.1
2gsoA	6.4564e+01	2gsoA/T0496-2gsoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2csoA	6.4879e+01	2csoA/T0496-2csoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i9cA	7.1764e+01	2i9cA/T0496-2i9cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t8oA	7.7194e+01	1t8oA/T0496-1t8oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.47.1.2
1fi4A	7.9920e+01	1fi4A/T0496-1fi4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1a0fA	8.0880e+01	1a0fA/T0496-1a0fA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bu8A	8.2378e+01	3bu8A/T0496-3bu8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1a7sA	8.5503e+01	1a7sA/T0496-1a7sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.47.1.2
1n2aA	8.6071e+01	1n2aA/T0496-1n2aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1q2hA	8.6208e+01	1q2hA/T0496-1q2hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.34.4.1
2o2kA	8.6481e+01	2o2kA/T0496-2o2kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001