# List of top-scoring protein chains for t06-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2f9iB	285	19.37		
1auk	489	20.17		
1cozA	129	23.73	c.26.1.2	31598
1ei6A	406	26.73	c.76.1.4	90443
2ovkC	159	30.30		
1p0zA	131	33.05	d.110.6.1	93882
1a7sA	225	34.32	b.47.1.2	26284
1t8oA	245	34.99	b.47.1.2	119187
3bu8A	235	38.33		
3bqoA	211	41.95		
1sb8A	352	42.31	c.2.1.2	105410
1q2hA	69	46.69	a.34.4.1	104498
2ptzA	432	51.93		
1gp8A	40	52.39	j.58.1.1	46342
2a31A	223	58.09	b.47.1.2	126068
2gsoA	393	60.15		
1iauA	227	62.44	b.47.1.2	62124
2ra3A	224	68.34		
1xauA	122	70.97	b.1.1.4	115041
2hh8A	149	71.80		
2v0xA	235	72.81		
1p3wA	404	75.10	c.67.1.3	87752
1p49A	562	77.55	c.76.1.2	94089
2b69A	343	77.64	c.2.1.2	127974
1h6oA	204	78.83	a.146.1.1	60689
2i9cA	123	83.88		
1oneA	436	85.49	c.1.11.1,d.54.1.1	29200,38844
2gu9A	113	86.10		
1eaxA	241	87.69	b.47.1.2	64889