# List of top-scoring protein chains for t06-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2f9iB	285	6.012		
1cozA	129	15.35	c.26.1.2	31598
1auk	489	17.83		
1ei6A	406	23.32	c.76.1.4	90443
1sb8A	352	27.35	c.2.1.2	105410
1p0zA	131	29.32	d.110.6.1	93882
2ovkC	159	29.90		
1a7sA	225	33.58	b.47.1.2	26284
2ptzA	432	41.08		
3bqoA	211	42.43		
3bu8A	235	45.57		
1q2hA	69	46.31	a.34.4.1	104498
1t8oA	245	48.27	b.47.1.2	119187
1um5L	219	48.51	b.1.1.1,b.1.1.2	113304,113305
2gsoA	393	55.53		
2a31A	223	58.78	b.47.1.2	126068
1ur4A	399	61.86	c.1.8.3	113402
1gp8A	40	64.21	j.58.1.1	46342
1p49A	562	68.88	c.76.1.2	94089
2ra3A	224	71.29		
1gy8A	397	71.59	c.2.1.2	83376
2v0xA	235	72.32		
1v04A	355	73.75	b.68.6.2	100240
1gvfA	286	76.67	c.1.10.2	70599
1iauA	227	76.70	b.47.1.2	62124
1oywA	523	77.42	a.4.5.43,c.37.1.19,c.37.1.19	93760,93761,93762
1fsuA	492	82.80	c.76.1.2	35032
1mexL	213	83.17	b.1.1.1,b.1.1.2	91259,91260
1oneA	436	85.39	c.1.11.1,d.54.1.1	29200,38844
1xauA	122	87.65	b.1.1.4	115041
1h6oA	204	88.17	a.146.1.1	60689