# List of top-scoring protein chains for t06-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2o2kA	355	3.606		
2f9iB	285	7.590		
2ejnA	153	10.47	a.101.1.1,a.101.1.1	132279,132280
1zkrA	153	16.01	a.101.1.1,a.101.1.1	125209,125210
1p0zA	131	16.48	d.110.6.1	93882
3bqoA	211	20.17		
2af6A	258	21.75		
1h6oA	204	23.74	a.146.1.1	60689
2a13A	166	24.64	b.60.1.8	125971
2f2hA	773	24.81	b.150.1.1,b.30.5.11,b.71.1.4,c.1.8.13	132818,132819,132820,132821
1oneA	436	25.19	c.1.11.1,d.54.1.1	29200,38844
1sb8A	352	26.13	c.2.1.2	105410
1rz2A	254	26.43	b.100.1.1	105130
1p3wA	404	30.44	c.67.1.3	87752
2f7tA	227	31.01		
2z16A	165	34.33		
1t5iA	172	38.18	c.37.1.19	106450
1ei6A	406	40.45	c.76.1.4	90443
1din	236	46.56		
2i9cA	123	47.10		
3cg0A	140	47.13		
1cozA	129	47.60	c.26.1.2	31598
2r25A	167	52.25		
1mfwA	107	52.34	d.15.11.1	84940
2yutA	207	55.53		
1puoA	170	57.83	a.101.1.1,a.101.1.1	95134,95135
1msk	331	60.89		
2b4jC	98	66.34	a.48.4.1	127835
2rilA	99	66.87		
2hq9A	149	67.10	b.45.1.1	136659
3bu8A	235	68.97		
1ijbA	202	69.96	c.62.1.1	71229
3cewA	125	71.10		
2gsoA	393	73.59		
2gu9A	113	75.28		
1brwA	433	77.20	a.46.2.1,c.27.1.1,d.41.3.1	17764,31628,38626
1yy7A	213	78.71		
1c9oA	66	84.98	b.40.4.5	25325