# List of top-scoring protein chains for t06-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2f9iB	285	11.08		
1ei6A	406	16.07	c.76.1.4	90443
1auk	489	18.66		
1sb8A	352	25.17	c.2.1.2	105410
1p0zA	131	27.98	d.110.6.1	93882
1cozA	129	31.36	c.26.1.2	31598
2i9cA	123	32.99		
2gsoA	393	40.31		
1a7sA	225	44.29	b.47.1.2	26284
3bqoA	211	47.26		
1kjnA	157	52.08	c.115.1.1	72614
1q2hA	69	57.35	a.34.4.1	104498
2ptzA	432	60.73		
1c9oA	66	63.85	b.40.4.5	25325
2i2wA	212	65.83		
1gp8A	40	72.12	j.58.1.1	46342
2vccA	891	72.22		
1tjlA	151	73.44	a.2.14.1,g.39.1.13	107027,107028
1oneA	436	79.31	c.1.11.1,d.54.1.1	29200,38844
1h6oA	204	79.51	a.146.1.1	60689
3bu8A	235	80.05		
1um5L	219	87.98	b.1.1.1,b.1.1.2	113304,113305
1t8oA	245	88.64	b.47.1.2	119187