Best Alignments for T0496

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1zotA	3.2645e+01	1zotA/T0496-1zotA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i1mA	3.4872e+01	2i1mA/T0496-2i1mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3b5qA	3.8820e+01	3b5qA/T0496-3b5qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1p49A	4.2001e+01	1p49A/T0496-1p49A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.76.1.2
2d4qA	4.8576e+01	2d4qA/T0496-2d4qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ibrB	5.1169e+01	1ibrB/T0496-1ibrB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.118.1.1
2csoA	5.2194e+01	2csoA/T0496-2csoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1neuA	5.5244e+01	1neuA/T0496-1neuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.1
1ryp2	5.6735e+01	1ryp2/T0496-1ryp2-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gp8A	5.9245e+01	1gp8A/T0496-1gp8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	j.58.1.1
1egaA	6.0528e+01	1egaA/T0496-1egaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8 d.52.3.1
2hs5A	6.5314e+01	2hs5A/T0496-2hs5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1e43A	7.0085e+01	1e43A/T0496-1e43A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fi4A	7.1144e+01	1fi4A/T0496-1fi4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1c9oA	7.1669e+01	1c9oA/T0496-1c9oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.40.4.5
1ht6A	7.2432e+01	1ht6A/T0496-1ht6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pvqA	7.3182e+01	2pvqA/T0496-2pvqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ntoA	7.3311e+01	2ntoA/T0496-2ntoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pd3A	7.4882e+01	1pd3A/T0496-1pd3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qgrA	7.5001e+01	1qgrA/T0496-1qgrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001