# List of top-scoring protein chains for t04-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1zotA	358	9.124		
1p49A	562	12.15	c.76.1.2	94089
3b5qA	482	12.52		
2i1mA	333	14.67		
1ryp2	233	19.14		
1egaA	301	33.03	c.37.1.8,d.52.3.1	32150,38836
1zwyA	185	40.06	c.51.4.3	125753
1lml	478	43.05		
1yrtA	364	43.45		
1umuA	116	43.72	b.87.1.1	28382
1wo8A	126	50.47	c.24.1.2	121110
1c9oA	66	57.84	b.40.4.5	25325
2ptzA	432	58.58		
1gp8A	40	62.60	j.58.1.1	46342
2d40A	354	66.72		
2f9iB	285	67.25		
2hs5A	239	69.48		
2af6A	258	70.40		
1mogA	67	77.28	d.230.2.1	85034
2v0xA	235	77.81		
1z6jT	211	77.89	b.1.2.1,b.1.2.1	124527,124528
2gsoA	393	84.79		
2daqA	110	85.56	b.34.9.2	131354
2iucA	375	85.81		
2o57A	297	86.96		
3cewA	125	89.98