Best Alignments for T0495

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2eo0A	2.6969e-01	2eo0A/T0495-2eo0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ob8A	7.8178e-01	1ob8A/T0495-1ob8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.52.1.18
1gefA	7.9695e-01	1gefA/T0495-1gefA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.52.1.18
1hh1A	1.8769e+00	1hh1A/T0495-1hh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.52.1.18
1y88A	2.4067e+00	1y88A/T0495-1y88A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.60.4.3 c.52.1.30
2inbA	2.2272e+01	2inbA/T0495-2inbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xmxA	5.7390e+01	1xmxA/T0495-1xmxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.52.1.26
2okfA	6.4916e+01	2okfA/T0495-2okfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q5cA	6.6123e+01	2q5cA/T0495-2q5cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pjuA	6.7122e+01	2pjuA/T0495-2pjuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yfbA	7.0246e+01	1yfbA/T0495-1yfbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2es9A	7.6791e+01	2es9A/T0495-2es9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2inpE	7.7425e+01	2inpE/T0495-2inpE-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1u20A	7.8880e+01	1u20A/T0495-1u20A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.113.1.1
1hg7A	8.9082e+01	1hg7A/T0495-1hg7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.1.1
1fr2B	8.9177e+01	1fr2B/T0495-1fr2B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zc1A	8.9646e+01	1zc1A/T0495-1zc1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1emvB	9.0846e+01	1emvB/T0495-1emvB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bdfA	9.1422e+01	1bdfA/T0495-1bdfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.74.3.1 d.181.1.1
1vknA	9.3787e+01	1vknA/T0495-1vknA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.2.1.3 d.81.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001