# List of top-scoring protein chains for T0495.t06-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1gefA	123	10.94	c.52.1.18	60465
2eo0A	147	18.62		
1ujzA	87	32.13	a.28.2.1	99475
1gebA	415	46.31	a.104.1.1	18932
1t85A	414	49.38	a.104.1.1	106650
1dz4A	414	50.55	a.104.1.1	18903
1qmqA	414	52.88	a.104.1.1	18907
2a1mA	415	52.93	a.104.1.1	126003
2ferA	411	53.15	a.104.1.1	133350
1iwkA	415	53.55	a.104.1.1	71490
1yrcA	414	53.60	a.104.1.1	123917
1p2yA	420	53.62	a.104.1.1	93961
1rf9A	417	53.64	a.104.1.1	111795
2zawA	415	53.65		
1iwjA	415	53.65	a.104.1.1	71489
2fe6A	421	53.68	a.104.1.1	133324
2a1oA	415	53.92		
1c8jA	414	54.33	a.104.1.1	59085
1y88A	199	54.69	a.60.4.3,c.52.1.30	116560,116561
2cp4A	414	54.76	a.104.1.1	18933
2a1nA	415	55.83		
6cp4A	414	56.59	a.104.1.1	18924
2erhA	87	63.92		
1hh1A	143	64.13	c.52.1.18	61036
2frzA	414	71.39	a.104.1.1	134001
2p4sA	373	77.32		
2p0oA	372	84.31