# List of top-scoring protein chains for t06-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2eo0A	147	0.4167		
1y88A	199	5.417	a.60.4.3,c.52.1.30	116560,116561
1gefA	123	7.685	c.52.1.18	60465
1ob8A	135	7.703	c.52.1.18	111627
1hh1A	143	11.69	c.52.1.18	61036
1bdfA	235	18.37	d.74.3.1,d.181.1.1	39727,42602
2inbA	140	24.54		
2pjuA	225	31.10		
1r6lA	239	49.49	d.14.1.4,d.101.1.1	97153,97154
2d7vA	162	54.85		
2q5cA	196	56.42		
1xmxA	385	62.77	c.52.1.26	115568
2rk0A	136	64.54		
2nv0A	196	70.99	c.23.16.1	138625
3b4tA	262	76.42		
2yxlA	450	77.21		
1hg7A	66	77.89	b.85.1.1	28280
3d64A	494	81.65		
1cxqA	162	89.47	c.55.3.2	33621