# List of top-scoring protein chains for t06-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2eo0A	147	0.5873		
1y88A	199	3.734	a.60.4.3,c.52.1.30	116560,116561
1gefA	123	5.190	c.52.1.18	60465
1ob8A	135	5.880	c.52.1.18	111627
1hh1A	143	12.87	c.52.1.18	61036
2inbA	140	26.97		
1vknA	351	47.60	c.2.1.3,d.81.1.1	108676,108677
3b4tA	262	47.62		
2rk0A	136	49.17		
1hg7A	66	50.08	b.85.1.1	28280
1bdfA	235	51.33	d.74.3.1,d.181.1.1	39727,42602
1r6lA	239	54.67	d.14.1.4,d.101.1.1	97153,97154
2pjuA	225	58.14		
1ucsA	64	60.47	b.85.1.1	88466
1qwoA	442	67.33	c.60.1.2	104620
1y56B	382	71.26		
1xmxA	385	73.03	c.52.1.26	115568
2yxlA	450	74.12		
1dosA	358	74.64	c.1.10.2	29175
2q5cA	196	76.42		
1cxqA	162	79.16	c.55.3.2	33621
2je6B	250	79.43		
1fxoA	293	80.65	c.68.1.6	34524