# List of top-scoring protein chains for t06-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2eo0A	147	5.393		
1xmxA	385	7.807	c.52.1.26	115568
1y88A	199	9.417	a.60.4.3,c.52.1.30	116560,116561
1ofzA	312	24.13	b.68.8.1	86978
2o55A	258	34.76		
2inbA	140	35.51		
1ob8A	135	51.71	c.52.1.18	111627
1vetA	124	63.14	d.110.7.1	108553
2jc5A	259	64.52		
1vc4A	254	66.44	c.1.2.4	100557
1hfuA	503	67.95	b.6.1.3,b.6.1.3,b.6.1.3	65827,65828,65829
1hh1A	143	71.86	c.52.1.18	61036
1gefA	123	73.31	c.52.1.18	60465
1pzxA	289	82.00	c.119.1.1	95484
2nv0A	196	89.51	c.23.16.1	138625
2piaA	321	89.67	b.43.4.2,c.25.1.2,d.15.4.2	25663,31553,37704