T0495.t2k.100-30-str

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
2eo0A	147	2.54e-03
1gefA	123	2.58e-03	1gefA	c.52.1.18
1hh1A	143	7.08e-03	1gefA	c.52.1.18
1ob8A	135	3.28e-02		c.52.1.18
1cliA	345	5.41e-02	1cliA	d.79.4.1
				d.139.1.1
1dctA	324	7.67e-02	6mhtA	c.66.1.26
2j5vA	367	8.45e-02
1zmdA	474	1.89e-01
1y88A	199	2.89e-01		a.60.4.3
				c.52.1.30
2nw5A	360	4.42e-01
2btuA	346	6.20e-01
1kshA	186	6.97e-01		c.37.1.8
1dosA	358	8.73e-01	1dosA	c.1.10.2
1j7nA	776	9.81e-01		d.92.1.14
				d.92.1.14
				d.166.1.1
3cc6A	281	9.92e-01
1iukA	140	1.02e+00		c.2.1.8
1tz9A	367	1.02e+00		c.1.15.6
2je6A	277	1.05e+00
1gvfA	286	1.05e+00		c.1.10.2
1yqyA	523	1.34e+00		d.92.1.14
				d.166.1.1
2zodA	345	1.37e+00
2yydA	345	1.37e+00
1eokA	290	1.39e+00	1eokA	c.1.8.5
1xesA	413	1.81e+00
1suuA	312	1.96e+00		b.68.10.1
1o12A	376	2.20e+00		b.92.1.5
				c.1.9.10
1q7fA	286	2.20e+00		b.68.9.1
2f9zC	159	2.26e+00
1g0uG	252	2.32e+00		d.153.1.4
1rypA	243	2.52e+00	1pmaA	d.153.1.4
1wfwA	74	2.56e+00		b.34.2.1
1ka9H	200	2.62e+00		c.23.16.1
2pbxA	203	3.06e+00
1l1jA	239	3.15e+00		b.47.1.1
1ohvA	472	3.17e+00		c.67.1.4
1sw2A	275	3.19e+00		c.94.1.1
1cozA	129	3.79e+00	1cozA	c.26.1.2
2fomB	185	3.88e+00		b.47.1.3
1vk3A	615	3.90e+00		d.79.4.1
				d.79.4.1
				d.139.1.1
				d.139.1.1
1lenA	181	3.91e+00	1led	b.29.1.1
2hs3A	603	4.01e+00		d.79.4.1
				d.79.4.1
				d.139.1.1
				d.139.1.1
1o0pA	104	4.19e+00		d.58.7.1
1j3nA	408	4.29e+00		c.95.1.1
				c.95.1.1
1mo9A	523	4.52e+00		c.3.1.5
				c.3.1.5
				d.87.1.1
2yquA	455	4.60e+00
1vf8A	377	4.79e+00		c.1.8.5
				d.26.3.1
1ygyA	529	4.84e+00		c.2.1.4
				c.23.12.1
				d.58.18.1
				d.81.2.2
1booA	323	4.86e+00	1booA	c.66.1.11
2e5vA	472	4.89e+00
1lvwA	295	5.18e+00		c.68.1.6
1l2lA	457	5.35e+00		c.72.1.3
3ladA	476	5.62e+00	1lvl	c.3.1.5
				c.3.1.5
				d.87.1.1
1yf5L	254	5.68e+00		c.55.1.11
				c.55.1.11
2ganA	190	5.78e+00		d.108.1.1
2abyA	146	5.82e+00
1adjA	421	5.89e+00	1adjA	c.51.1.1
				d.104.1.1
3bqxA	150	6.54e+00
1vffA	423	6.56e+00		c.1.8.4
1zthA	258	6.81e+00
1yk4A	52	6.83e+00
2anuA	255	6.87e+00		c.6.3.1
2rauA	354	7.33e+00
2oodA	475	7.37e+00
1xfkA	336	7.48e+00		c.42.1.1
1n8fA	350	7.64e+00		c.1.10.4
1iow	306	7.66e+00	1iow
1iowA	306	7.66e+00		c.30.1.2
				d.142.1.1
1gg1A	350	7.80e+00	1qr7A	c.1.10.4
2o88A	58	7.94e+00
1bbzA	58	8.01e+00	1bbzA	b.34.2.1
2dgmA	466	8.01e+00		c.67.1.6
1aogA	485	8.08e+00	3grs	c.3.1.5
				c.3.1.5
				d.87.1.1
1aboA	62	8.09e+00	1bbzA	b.34.2.1
1to3A	304	8.25e+00		c.1.10.1

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
1of5B	184	8.36e+00		d.17.4.2
1pmmA	466	8.39e+00		c.67.1.6
1qrrA	394	8.48e+00	1qrrA	c.2.1.2
2iswA	323	8.60e+00
1e9lA	377	8.71e+00	1e9lA	c.1.8.5
				d.26.3.1
2ex4A	241	8.83e+00		c.66.1.42
2p4hX	322	8.88e+00
1qr7A	350	9.00e+00	1qr7A	c.1.10.4
1i24A	404	9.04e+00		c.2.1.2
1e4eA	343	9.10e+00	1iow	c.30.1.2
				d.142.1.1
2iu4A	336	9.38e+00
2iz6A	176	9.43e+00
1f9yA	158	9.79e+00		d.58.30.1
1rvgA	305	1.02e+01		c.1.10.2
2v79A	135	1.03e+01
1o7fA	469	1.04e+01		a.4.5.31
				b.82.3.2
				b.82.3.2
1dgmA	363	1.06e+01	1bx4A	c.72.1.1
2okfA	140	1.07e+01
2bcgG	453	1.07e+01		c.3.1.3
				c.3.1.3
				d.16.1.6
2inbA	140	1.09e+01
2dgkA	452	1.09e+01
3bfmA	235	1.10e+01
1jq4A	98	1.11e+01		d.15.4.2
1pv9A	348	1.16e+01		c.55.2.1
				d.127.1.1
1konA	249	1.16e+01		e.39.1.1
2cvjA	180	1.18e+01
1h5rA	293	1.19e+01		c.68.1.6
2ywlA	180	1.19e+01
1xmxA	385	1.22e+01		c.52.1.26
2q7eA	291	1.22e+01
1i2cA	404	1.23e+01		c.2.1.2
1brfA	53	1.23e+01	1rb9	g.41.5.1
2afbA	351	1.25e+01		c.72.1.1
1bq8A	54	1.25e+01	1rb9	g.41.5.1
1bq9A	54	1.25e+01	1rb9	g.41.5.1
1h6vA	499	1.25e+01	3grs	c.3.1.5
				c.3.1.5
				d.87.1.1
1v25A	541	1.25e+01		e.23.1.1
2q8zA	342	1.27e+01
1a9nB	96	1.27e+01	1urnA	d.58.7.1
1jofA	365	1.29e+01		b.69.10.1
1u2cA	246	1.30e+01		b.1.6.2
				d.272.1.1
1bli	483	1.31e+01	1bli
2basA	431	1.34e+01		c.1.33.1
				d.110.6.2
1z7dA	433	1.37e+01		c.67.1.4
2aqjA	538	1.38e+01
1hurA	180	1.40e+01	1hurA	c.37.1.8
2dvkA	188	1.41e+01
1v74A	107	1.41e+01		d.243.1.1
2ltnA	181	1.41e+01	1led	b.29.1.1
1ordA	730	1.43e+01	1ordA	c.23.1.4
				c.67.1.5
				d.125.1.1
2jerA	389	1.44e+01
2pvxA	54	1.44e+01
1fxoA	293	1.45e+01	1g0rA	c.68.1.6
1wkyA	464	1.45e+01		b.18.1.31
				c.1.8.3
1g0rA	293	1.46e+01	1g0rA	c.68.1.6
1k0wA	231	1.46e+01		c.74.1.1
5croA	66	1.47e+01	1orc	a.35.1.2
2p7oA	133	1.50e+01
6rxnA	45	1.50e+01		g.41.5.1
1w97L	246	1.53e+01		c.55.1.11
				c.55.1.11
1oh0A	131	1.54e+01		d.17.4.3
1w4xA	542	1.54e+01		c.3.1.5
				c.3.1.5
2zceA	291	1.55e+01
1yr0A	175	1.57e+01		d.108.1.1
2pb2A	420	1.60e+01
1lt4A	247	1.62e+01	1lt3A	d.166.1.1
1d0bA	213	1.64e+01	1d0bA	c.10.2.1
1h4vB	421	1.65e+01	1adjA	c.51.1.1
				d.104.1.1
1ijyA	130	1.66e+01	1ijxA	a.141.1.1
1y81A	138	1.66e+01		c.2.1.8
1pmaA	233	1.67e+01	1pmaA	d.153.1.4
1wm1A	317	1.68e+01		c.69.1.7
1sx5A	244	1.68e+01		c.52.1.2
3cz8A	319	1.69e+01
1nd4A	264	1.69e+01		d.144.1.6
3clkA	290	1.74e+01
1xqwA	293	1.76e+01
1fe0A	68	1.77e+01	1cc8A	d.58.17.1
2pezA	179	1.78e+01
1b94A	244	1.79e+01	1rvaA	c.52.1.2
1yrrA	382	1.80e+01		b.92.1.5
				c.1.9.10
1ml8A	134	1.80e+01		d.227.1.2

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
2dsxA	52	1.83e+01		g.41.5.1
3bhwA	209	1.86e+01
2d4pA	141	1.86e+01
1kmmA	424	1.87e+01	1adjA	c.51.1.1
				d.104.1.1
1bssA	244	1.88e+01	1rvaA	c.52.1.2
2z2nA	299	1.89e+01
1eonA	245	1.92e+01	1rvaA	c.52.1.2
1ov3A	138	1.95e+01		b.34.2.1
				b.34.2.1
1b97A	244	1.95e+01	1rvaA	c.52.1.2
2i2qA	137	1.96e+01
1z15A	344	1.96e+01
1fpqA	372	1.97e+01	1fpqA	a.4.5.29
				c.66.1.12
1h6tA	291	1.97e+01		b.1.18.15
				c.10.2.1
1i2sA	282	1.98e+01		e.3.1.1
2oz8A	389	1.99e+01
1fp1D	372	2.00e+01	1fpqA	a.4.5.29
				c.66.1.12
1ybqB	390	2.00e+01
2b2nA	344	2.01e+01		c.37.1.19
2bh1A	250	2.01e+01		c.55.1.11
				c.55.1.11
2jc5A	259	2.01e+01
2pzmA	330	2.01e+01
1jdiA	231	2.04e+01		c.74.1.1
1mtzA	293	2.05e+01		c.69.1.7
2uubD	209	2.07e+01		d.66.1.2
1a9cA	221	2.10e+01	1a8rA	d.96.1.1
1w0mA	226	2.11e+01		c.1.1.1
2ax4A	198	2.13e+01
1ceo	343	2.13e+01	1ceo
1ceoA	343	2.13e+01		c.1.8.3
1onwA	390	2.16e+01		b.92.1.7
				c.1.9.13
1ky9A	448	2.17e+01		b.36.1.4
				b.47.1.1
1qb5D	99	2.19e+01		b.40.2.1
2fqpA	97	2.19e+01
3bs2A	148	2.20e+01
1uv7A	110	2.20e+01		d.67.4.1
1tiiD	99	2.21e+01	1tiiD	b.40.2.1
4blmA	265	2.22e+01	1btl	e.3.1.1
1e43A	483	2.24e+01	1bli	b.71.1.1
				c.1.8.1
1j33A	335	2.27e+01		c.39.1.1
2hl0A	143	2.30e+01
1y2qA	143	2.34e+01
2icgA	160	2.34e+01
1b96A	244	2.36e+01	1rvaA	c.52.1.2
1usgA	346	2.37e+01		c.93.1.1
2dnrA	91	2.37e+01
1ndoA	449	2.37e+01	1ndoA	b.33.1.2
				d.129.3.3
2idrA	177	2.38e+01
1eg9A	449	2.44e+01	1ndoA	b.33.1.2
				d.129.3.3
2es9A	115	2.45e+01		a.247.1.1
1hg3A	225	2.49e+01	1hg3A	c.1.1.1
2absA	383	2.53e+01		c.72.1.1
2pveA	54	2.53e+01
1jndA	420	2.53e+01		c.1.8.5
				d.26.3.1
1opy	131	2.56e+01	1opy
1ea2A	131	2.56e+01		d.17.4.3
1dmmA	131	2.58e+01	1opy	d.17.4.3
1xx6A	191	2.58e+01		c.37.1.24
				g.39.1.14
1zmyA	142	2.58e+01
2glfA	450	2.58e+01
1wx1A	335	2.61e+01
2oikA	154	2.67e+01
1iroA	54	2.70e+01		g.41.5.1
2liv	344	2.72e+01	2liv
1vm7A	311	2.72e+01		c.72.1.1
1tfuA	157	2.72e+01		c.26.1.3
1seiA	130	2.73e+01	1seiA	d.140.1.1
2qulA	290	2.73e+01
1b2jA	54	2.75e+01	1rb9	g.41.5.1
1d2rB	326	2.76e+01	1d2rB	c.26.1.1
2eh6A	375	2.80e+01
1d2rA	326	2.80e+01	1d2rB	c.26.1.1
1uwsA	489	2.81e+01		c.1.8.4
1xvaA	292	2.81e+01	1xvaA	c.66.1.5
1a8rA	221	2.82e+01	1a8rA	d.96.1.1
2avxA	171	2.85e+01
2cwdA	161	2.88e+01
1orc	71	2.89e+01	1orc
1orcA	71	2.89e+01		a.35.1.2
3cxjA	165	2.92e+01
1b2oA	54	2.95e+01	1rb9	g.41.5.1
1lml	478	2.95e+01	1lml
1lmlA	478	2.95e+01		d.92.1.3
1m22A	503	3.09e+01		c.117.1.1
2r76A	152	3.13e+01
1b13A	54	3.14e+01	1rb9	g.41.5.1
1xdwA	331	3.22e+01
1gmlA	178	3.23e+01		c.8.5.2

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
2pifA	276	3.27e+01
2bx2L	517	3.28e+01
2j8gA	339	3.28e+01
2ggoA	401	3.31e+01
2a5lA	200	3.32e+01		c.23.5.8
1o7nA	449	3.35e+01		b.33.1.2
				d.129.3.3
1ja9A	274	3.36e+01		c.2.1.2
3b85A	208	3.39e+01
1k0iA	394	3.40e+01		c.3.1.2
				d.16.1.2
2jhnA	295	3.40e+01
1vr8A	142	3.42e+01		d.312.1.1
2au3A	407	3.43e+01
2scuB	388	3.43e+01	2scuB	c.23.4.1
				d.142.1.4
3c1oA	321	3.45e+01
2pv2A	103	3.45e+01
1h09A	338	3.46e+01		b.109.1.1
				c.1.8.8
2evbA	74	3.49e+01
2jbaA	127	3.49e+01
1wqsA	173	3.54e+01
2bdqA	224	3.55e+01
3bv4A	341	3.59e+01
2akoA	251	3.60e+01		c.73.1.3
1h7sA	365	3.60e+01		d.14.1.3
				d.122.1.2
2yzkA	178	3.60e+01
1qd6C	240	3.61e+01	1qd5A
1g5hA	454	3.62e+01	1g5hA	c.51.1.1
				d.104.1.1
1lt3A	240	3.65e+01	1lt3A	d.166.1.1
1x1nA	524	3.66e+01		c.1.8.1
2f62A	161	3.68e+01		c.23.14.1
1tljA	213	3.69e+01		d.282.1.1
2pziA	681	3.71e+01
3bmaA	407	3.74e+01
2nu8B	388	3.78e+01
1p7tA	731	3.80e+01		c.1.13.1
2jroA	78	3.80e+01
1sw5B	275	3.84e+01		c.94.1.1
1an7A	136	3.85e+01	1seiA	d.140.1.1
1sw5A	275	3.88e+01		c.94.1.1
2fnuA	375	3.88e+01		c.67.1.4
2e8yA	718	3.91e+01
2fyqA	194	3.91e+01
2h4uA	145	3.92e+01		d.38.1.5
2bmbA	545	3.94e+01
1zesA	125	3.94e+01		c.23.1.1
1d2gA	292	3.96e+01	1xvaA	c.66.1.5
2o7iA	592	3.96e+01
1c0aA	585	3.97e+01	1c0aA	b.40.4.1
				d.74.4.1
				d.104.1.1
1vjfA	180	4.00e+01		d.116.1.1

Please cite the following papers:

Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001
Karplus, K. and Karchin, R. and Draper, J. and Casper, J. and Mandel-Gutfreund, Y. and Diekhans, M. and Hughey, R. ``Combining local-structure, fold-recognition, and new-fold methods for protein structure prediction'' Proteins: Structure Function and Genetics53(S6):491-496,15 Oct 2003
Rachel Karchin, Melissa Cline, Yael Mandel-Gutfreund, and Kevin Karplus. ``Hidden Markov models that use predicted local structure for fold recognition: alphabets of backbone geometry.'' Proteins: Structure, Function, and Genetics, 51(4):504--514, June 2003.