Best Alignments for T0495

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2eo0A	1.7692e-01	2eo0A/T0495-2eo0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gefA	7.4345e-01	1gefA/T0495-1gefA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.52.1.18
1ob8A	8.1619e-01	1ob8A/T0495-1ob8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.52.1.18
1y88A	1.3492e+00	1y88A/T0495-1y88A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.60.4.3 c.52.1.30
1hh1A	1.4803e+00	1hh1A/T0495-1hh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.52.1.18
2inbA	1.9014e+01	2inbA/T0495-2inbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xmxA	4.4287e+01	1xmxA/T0495-1xmxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.52.1.26
2okfA	5.8334e+01	2okfA/T0495-2okfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pjuA	7.0806e+01	2pjuA/T0495-2pjuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yfbA	7.2646e+01	1yfbA/T0495-1yfbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2inpE	7.5994e+01	2inpE/T0495-2inpE-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1emvB	7.7297e+01	1emvB/T0495-1emvB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fr2B	7.8519e+01	1fr2B/T0495-1fr2B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1u20A	7.9371e+01	1u20A/T0495-1u20A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.113.1.1
1hg7A	8.5047e+01	1hg7A/T0495-1hg7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.1.1
2q5cA	8.7235e+01	2q5cA/T0495-2q5cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dq3A	8.7515e+01	1dq3A/T0495-1dq3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i00A	9.2148e+01	2i00A/T0495-2i00A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ucsA	9.2292e+01	1ucsA/T0495-1ucsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.1.1
2es9A	9.4537e+01	2es9A/T0495-2es9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001