# List of top-scoring protein chains for t2k-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2eo0A	147	0.03421		
1gefA	123	0.05857	c.52.1.18	60465
1ob8A	135	0.07184	c.52.1.18	111627
1hh1A	143	0.1924	c.52.1.18	61036
1y88A	199	0.6713	a.60.4.3,c.52.1.30	116560,116561
1y0pA	571	5.974	a.138.1.3,c.3.1.4,d.168.1.1	122507,122508,122509
2inbA	140	8.345		
2bs2A	660	21.64	a.7.3.1,c.3.1.4,d.168.1.1	129030,129031,129032
2fp4B	395	23.65	c.23.4.1,d.142.1.4	133897,133898
1i24A	404	24.76	c.2.1.2	83663
2okfA	140	25.46		
1ohpA	125	28.34	d.17.4.3	118702
2j9oA	298	30.34		
2qc1B	212	38.10		
2bs3A	656	43.65	a.7.3.1,c.3.1.4,d.168.1.1	129042,129043,129044
2gq0A	303	44.57		
2cuyA	305	53.16		
2yueA	168	54.13		
1i2cA	404	56.10	c.2.1.2	83666
1i82A	189	56.58	b.1.9.2	61937
1r6lA	239	62.55	d.14.1.4,d.101.1.1	97153,97154
1oroA	213	64.57	c.61.1.1	34093
2a15A	139	65.56	d.17.4.3	125973
2zfdB	123	70.05		
2j7vA	298	70.13		
1ofzA	312	70.31	b.68.8.1	86978
2je6B	250	73.04		
1qrrA	394	82.95	c.2.1.2	29824
2f3nA	76	84.20	a.60.1.2	132885
1dzfA	215	86.94	c.52.3.1,d.78.1.1	33344,39753