# List of top-scoring protein chains for t2k-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2eo0A	147	0.04311		
1gefA	123	0.06070	c.52.1.18	60465
1ob8A	135	0.08181	c.52.1.18	111627
1hh1A	143	0.2320	c.52.1.18	61036
1y88A	199	1.178	a.60.4.3,c.52.1.30	116560,116561
2inbA	140	7.563		
1y0pA	571	11.87	a.138.1.3,c.3.1.4,d.168.1.1	122507,122508,122509
2okfA	140	24.22		
2gq0A	303	29.01		
1i24A	404	31.04	c.2.1.2	83663
2j9oA	298	34.37		
1r6lA	239	39.66	d.14.1.4,d.101.1.1	97153,97154
2yueA	168	43.09		
2je6B	250	47.90		
2qc1B	212	50.25		
2fp4B	395	53.59	c.23.4.1,d.142.1.4	133897,133898
2i87A	364	56.10		
2bs2A	660	57.89	a.7.3.1,c.3.1.4,d.168.1.1	129030,129031,129032
1ohpA	125	62.30	d.17.4.3	118702
1i82A	189	69.66	b.1.9.2	61937
1z3qA	200	69.98		
1aunA	208	71.69	b.25.1.1	23900
1vqoB	338	72.80	b.43.3.2	120363
2bllA	345	76.47	c.2.1.2	128733
2j7vA	298	77.58		
1i2cA	404	86.44	c.2.1.2	83666
1jj2B	337	86.65	b.43.3.2	63086