# List of top-scoring protein chains for t2k-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2eo0A	147	1.115		
1gefA	123	2.214	c.52.1.18	60465
1y88A	199	2.999	a.60.4.3,c.52.1.30	116560,116561
1hh1A	143	3.496	c.52.1.18	61036
3dczA	207	10.79		
1ob8A	135	11.13	c.52.1.18	111627
2inbA	140	14.40		
2yueA	168	21.03		
2nn6E	305	22.87		
2je6B	250	26.03		
2vl6A	268	26.28		
2qc1B	212	31.43		
2okfA	140	37.30		
1i7nA	309	44.75	c.30.1.5,d.142.1.3	83681,83682
2p4oA	306	50.04		
2nn6B	249	51.42		
1ofzA	312	51.77	b.68.8.1	86978
1y0pA	571	53.53	a.138.1.3,c.3.1.4,d.168.1.1	122507,122508,122509
2bs2A	660	59.60	a.7.3.1,c.3.1.4,d.168.1.1	129030,129031,129032
1r6lA	239	63.21	d.14.1.4,d.101.1.1	97153,97154
1c9uA	454	66.78	b.68.2.1	27623
2ph0A	174	70.19		
1zirA	173	70.20	b.11.1.1,b.11.1.1	125126,125127
2a8sA	212	73.82	d.113.1.1	126416
1ermA	263	81.57	e.3.1.1	42690
1k2xB	143	82.00		
2h88A	621	82.14		
1amm	174	82.52		
2bsyA	278	83.08	b.85.4.1,b.85.4.1	129129,129130
2rg8A	165	84.76		
1w32A	348	87.68	c.1.8.3	114120