Best Alignments for T0495

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2eo0A	2.3924e-01	2eo0A/T0495-2eo0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1y88A	6.3048e-01	1y88A/T0495-1y88A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.60.4.3 c.52.1.30
1hh1A	3.6576e+00	1hh1A/T0495-1hh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.52.1.18
1gefA	4.1596e+00	1gefA/T0495-1gefA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.52.1.18
1ob8A	4.3713e+00	1ob8A/T0495-1ob8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.52.1.18
2inbA	1.9091e+01	2inbA/T0495-2inbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xmxA	3.6383e+01	1xmxA/T0495-1xmxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.52.1.26
2pjuA	5.2153e+01	2pjuA/T0495-2pjuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bdfA	5.2349e+01	1bdfA/T0495-1bdfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.74.3.1 d.181.1.1
2rk0A	6.6150e+01	2rk0A/T0495-2rk0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2okfA	6.9071e+01	2okfA/T0495-2okfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yfbA	7.1041e+01	1yfbA/T0495-1yfbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q5cA	7.2085e+01	2q5cA/T0495-2q5cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dq3A	7.5926e+01	1dq3A/T0495-1dq3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ozgA	8.3183e+01	2ozgA/T0495-2ozgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2v1nA	8.6036e+01	2v1nA/T0495-2v1nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jy4A	8.6226e+01	1jy4A/T0495-1jy4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ojqA	8.7373e+01	1ojqA/T0495-1ojqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.166.1.1
2oaiA	9.0088e+01	2oaiA/T0495-2oaiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hv2A	9.0957e+01	2hv2A/T0495-2hv2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001