# List of top-scoring protein chains for T0495.t06-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2eo0A	147	12.85		
1gefA	123	17.85	c.52.1.18	60465
1y88A	199	21.44	a.60.4.3,c.52.1.30	116560,116561
1ujzA	87	26.19	a.28.2.1	99475
2p4sA	373	38.44		
2jc5A	259	44.26		
2erhA	87	54.19		
1hh1A	143	78.76	c.52.1.18	61036
1awiA	138	84.04	d.110.1.1	40871
2pbdP	139	84.26		
1gebA	415	87.49	a.104.1.1	18932
1w6rA	543	88.94	c.69.1.1	114283
1ut6A	537	89.10	c.69.1.1	119698
1ea5A	537	89.10	c.69.1.1	34592
1gqrA	532	89.21	c.69.1.1	70374
1eeaA	534	89.23	c.69.1.1	34609
2dfpA	534	89.24	c.69.1.1	34597
2cekA	535	89.25	c.69.1.1	130347