# List of top-scoring protein chains for t06-w0.5-1-o_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2eo0A	147	0.1696		
1y88A	199	1.048	a.60.4.3,c.52.1.30	116560,116561
1hh1A	143	3.630	c.52.1.18	61036
1ob8A	135	5.095	c.52.1.18	111627
1gefA	123	5.704	c.52.1.18	60465
2inbA	140	21.18		
1bdfA	235	27.76	d.74.3.1,d.181.1.1	39727,42602
1xmxA	385	28.85	c.52.1.26	115568
2pjuA	225	42.87		
1r6lA	239	48.61	d.14.1.4,d.101.1.1	97153,97154
2yxlA	450	52.82		
2rk0A	136	52.94		
1y1oA	203	61.70	c.52.1.28	116345
1hg7A	66	63.54	b.85.1.1	28280
3d64A	494	64.54		
2d7vA	162	68.71		
1ojqA	212	69.11	d.166.1.1	93146
2okfA	140	70.99		
2im9A	333	75.27	d.3.1.13	137508
1ucsA	64	75.77	b.85.1.1	88466