# List of top-scoring protein chains for t06-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2eo0A	147	0.1844		
1y88A	199	1.618	a.60.4.3,c.52.1.30	116560,116561
1hh1A	143	5.542	c.52.1.18	61036
1gefA	123	7.394	c.52.1.18	60465
1ob8A	135	9.095	c.52.1.18	111627
2inbA	140	19.66		
1bdfA	235	28.18	d.74.3.1,d.181.1.1	39727,42602
1xmxA	385	53.62	c.52.1.26	115568
2v14A	134	53.70		
1hg7A	66	59.78	b.85.1.1	28280
2pjuA	225	61.41		
1r6lA	239	64.53	d.14.1.4,d.101.1.1	97153,97154
2d7vA	162	64.89		
3d64A	494	66.63		
1ucsA	64	71.51	b.85.1.1	88466
2okfA	140	71.91		
1m1nB	522	73.27	c.92.2.3	78418
2rk0A	136	73.62		
2yxlA	450	81.45		
1dosA	358	85.33	c.1.10.2	29175
1ojqA	212	85.62	d.166.1.1	93146