# List of top-scoring protein chains for t06-w0.5-1-o_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2eo0A	147	0.1965		
1y88A	199	1.750	a.60.4.3,c.52.1.30	116560,116561
1hh1A	143	5.278	c.52.1.18	61036
1ob8A	135	7.870	c.52.1.18	111627
1gefA	123	8.670	c.52.1.18	60465
2inbA	140	20.35		
1bdfA	235	20.98	d.74.3.1,d.181.1.1	39727,42602
1xmxA	385	42.63	c.52.1.26	115568
2pjuA	225	50.05		
1r6lA	239	53.34	d.14.1.4,d.101.1.1	97153,97154
2yxlA	450	55.83		
2d7vA	162	58.70		
3d64A	494	63.41		
2rk0A	136	63.64		
1hg7A	66	67.17	b.85.1.1	28280
1ojqA	212	74.86	d.166.1.1	93146
2v14A	134	75.77		
1ucsA	64	78.88	b.85.1.1	88466
3b4tA	262	87.24		
1m1nB	522	87.42	c.92.2.3	78418
2okfA	140	89.01