# List of top-scoring protein chains for t06-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2eo0A	147	0.3800		
1y88A	199	1.483	a.60.4.3,c.52.1.30	116560,116561
1gefA	123	5.703	c.52.1.18	60465
1ob8A	135	6.897	c.52.1.18	111627
1hh1A	143	7.771	c.52.1.18	61036
2inbA	140	26.66		
1hg7A	66	45.19	b.85.1.1	28280
2yxlA	450	51.41		
1r6lA	239	52.02	d.14.1.4,d.101.1.1	97153,97154
3b4tA	262	52.58		
1xmxA	385	53.83	c.52.1.26	115568
1ucsA	64	54.04	b.85.1.1	88466
2rk0A	136	55.68		
1ojqA	212	58.58	d.166.1.1	93146
1wwzA	159	60.89	d.108.1.1	121380
1dosA	358	63.91	c.1.10.2	29175
1bdfA	235	64.61	d.74.3.1,d.181.1.1	39727,42602
1vknA	351	72.70	c.2.1.3,d.81.1.1	108676,108677
2pjuA	225	79.20