# List of top-scoring protein chains for t06-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1y88A	199	2.562	a.60.4.3,c.52.1.30	116560,116561
2eo0A	147	4.704		
1xmxA	385	6.785	c.52.1.26	115568
1ofzA	312	34.79	b.68.8.1	86978
2inbA	140	36.35		
2o55A	258	43.10		
1hfuA	503	44.11	b.6.1.3,b.6.1.3,b.6.1.3	65827,65828,65829
1hh1A	143	50.66	c.52.1.18	61036
1v10A	521	60.51	b.6.1.3,b.6.1.3,b.6.1.3	108224,108225,108226
2jc5A	259	66.89		
3c0iA	351	72.87		
2qhnA	323	80.00		
1ob8A	135	80.20	c.52.1.18	111627
2piaA	321	82.15	b.43.4.2,c.25.1.2,d.15.4.2	25663,31553,37704