# this cost function was optimized on the 26 highest E-value targets of CASP7, # on initial models from TryAllAlign # to optimize tau_3 correlation with real_cost # The threshold for using this cost function is about E-value > 0.004. SetCost pred_o_notor_back 24.9071 \ phobic_radius 0.719037 \ alpha 13.3383 \ pred_str4_back 11.4908 \ break 3.91581 \ pred_nb11_back 8.79378 \ align_bonus 23.6988 \ rejected_constraints 3.02496 \ ehl2_constraints 3.05593 \ near_backbone 1.59329 \ knot 1.25406 \ maybe_ssbond 2.69615 \ old_n_ca_c 1.51204