Best Alignments for T0493

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1pjrA	7.8235e-20	1pjrA/T0493-1pjrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19
2is6A	1.8701e-19	2is6A/T0493-2is6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pjr	3.8979e-19	1pjr/T0493-1pjr-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w36B	5.8130e-18	1w36B/T0493-1w36B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19 c.52.1.24
1w36C	2.9234e-14	1w36C/T0493-1w36C-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19 c.52.1.25
2gk6A	3.3504e-14	2gk6A/T0493-2gk6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w36D	1.3384e-05	1w36D/T0493-1w36D-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19
1uaaA	5.3178e-02	1uaaA/T0493-1uaaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19
1qhhD	2.5001e-01	1qhhD/T0493-1qhhD-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hjvA	5.4097e-01	2hjvA/T0493-2hjvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t5iA	8.1748e-01	1t5iA/T0493-1t5iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19
1fukA	1.0049e+00	1fukA/T0493-1fukA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19
1oywA	3.5994e+00	1oywA/T0493-1oywA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.43 c.37.1.19 c.37.1.19
2jgnA	6.6595e+00	2jgnA/T0493-2jgnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1usgA	7.1303e+00	1usgA/T0493-1usgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
2v1xA	9.0883e+00	2v1xA/T0493-2v1xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z15A	1.0270e+01	1z15A/T0493-1z15A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ch7A	1.5024e+01	3ch7A/T0493-3ch7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1va0A	1.7007e+01	1va0A/T0493-1va0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.90.1.1
3cssA	1.7079e+01	3cssA/T0493-3cssA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001