Best Alignments for T0493

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2is6A	5.5551e-19	2is6A/T0493-2is6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pjrA	2.1323e-17	1pjrA/T0493-1pjrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19
1w36B	2.9719e-14	1w36B/T0493-1w36B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19 c.52.1.24
1pjr	4.9221e-14	1pjr/T0493-1pjr-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uaaA	1.2137e-13	1uaaA/T0493-1uaaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19
1qhhD	9.5785e-11	1qhhD/T0493-1qhhD-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w36C	5.1427e-09	1w36C/T0493-1w36C-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19 c.52.1.25
2gk6A	9.6642e-09	2gk6A/T0493-2gk6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w36D	1.5258e-08	1w36D/T0493-1w36D-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19
1d2mA	1.2483e+01	1d2mA/T0493-1d2mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19
2v1xA	1.6208e+01	2v1xA/T0493-2v1xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2g7zA	2.0841e+01	2g7zA/T0493-2g7zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2iwtA	2.1601e+01	2iwtA/T0493-2iwtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1m6nA	2.7656e+01	1m6nA/T0493-1m6nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19
2oe3A	2.7888e+01	2oe3A/T0493-2oe3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1lu4A	2.8225e+01	1lu4A/T0493-1lu4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.10
1hv8A	3.0800e+01	1hv8A/T0493-1hv8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19
1tf5A	3.1080e+01	1tf5A/T0493-1tf5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19
1jetA	3.4307e+01	1jetA/T0493-1jetA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.94.1.1
2dt8A	3.4842e+01	2dt8A/T0493-2dt8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001