Best Alignments for T0493

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1pjrA	3.6396e-21	1pjrA/T0493-1pjrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19
1pjr	6.3585e-20	1pjr/T0493-1pjr-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w36B	6.6411e-20	1w36B/T0493-1w36B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19 c.52.1.24
2is6A	2.6216e-19	2is6A/T0493-2is6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gk6A	2.4687e-15	2gk6A/T0493-2gk6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w36C	5.3785e-15	1w36C/T0493-1w36C-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19 c.52.1.25
2hjvA	1.7285e-01	2hjvA/T0493-2hjvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fukA	1.9278e-01	1fukA/T0493-1fukA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19
1t5iA	2.3921e-01	1t5iA/T0493-1t5iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19
1oywA	4.7801e-01	1oywA/T0493-1oywA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.43 c.37.1.19 c.37.1.19
2v1xA	1.7770e+00	2v1xA/T0493-2v1xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2jgnA	2.1790e+00	2jgnA/T0493-2jgnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1usgA	2.6787e+00	1usgA/T0493-1usgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
1yksA	3.3081e+00	1yksA/T0493-1yksA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.14 c.37.1.14
1z15A	4.2982e+00	1z15A/T0493-1z15A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2v8oA	5.7022e+00	2v8oA/T0493-2v8oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2va8A	6.4723e+00	2va8A/T0493-2va8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1peaA	6.7787e+00	1peaA/T0493-1peaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
3ch7A	6.8295e+00	3ch7A/T0493-3ch7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ckmA	6.8909e+00	3ckmA/T0493-3ckmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001