Best Alignments for T0493

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1pjr	5.8171e-21	1pjr/T0493-1pjr-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2is6A	5.8883e-20	2is6A/T0493-2is6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pjrA	2.9475e-19	1pjrA/T0493-1pjrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19
1w36B	3.2386e-17	1w36B/T0493-1w36B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19 c.52.1.24
1w36C	2.9886e-16	1w36C/T0493-1w36C-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19 c.52.1.25
2gk6A	1.0214e-15	2gk6A/T0493-2gk6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w36D	1.1783e-12	1w36D/T0493-1w36D-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19 c.37.1.19
2hjvA	1.0422e-01	2hjvA/T0493-2hjvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t5iA	4.3043e-01	1t5iA/T0493-1t5iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19
1fukA	6.8619e-01	1fukA/T0493-1fukA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.19
2i4iA	2.2652e+00	2i4iA/T0493-2i4iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1usgA	4.7292e+00	1usgA/T0493-1usgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
2jgnA	5.5965e+00	2jgnA/T0493-2jgnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2liv	6.2159e+00	2liv/T0493-2liv-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z15A	7.1790e+00	1z15A/T0493-1z15A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1va0A	7.6367e+00	1va0A/T0493-1va0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.90.1.1
2db3A	8.6418e+00	2db3A/T0493-2db3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2z0mA	9.1984e+00	2z0mA/T0493-2z0mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1oywA	1.0448e+01	1oywA/T0493-1oywA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.43 c.37.1.19 c.37.1.19
1gs5A	1.1253e+01	1gs5A/T0493-1gs5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.73.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001