Best Alignments for T0492

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2h3jA/T0492-2h3jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h3jA/T0492-2h3jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7670e-095.81e-27
2gcxA/T0492-2gcxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gcxA/T0492-2gcxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7275e-097.95e-26
1fx7A/T0492-1fx7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fx7A/T0492-1fx7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7738e-043.05e-18 1bi0 a.4.5.24
a.76.1.1
b.34.1.2
2qq9A/T0492-2qq9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qq9A/T0492-2qq9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6599e-023.83e-10
1qw1A/T0492-1qw1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qw1A/T0492-1qw1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4339e-011.51e-05
1aboA/T0492-1aboA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aboA/T0492-1aboA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5532e-019.05e-14 1bbzA b.34.2.1
1zx6A/T0492-1zx6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zx6A/T0492-1zx6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7756e-013.93e-14
3c0cA/T0492-3c0cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3c0cA/T0492-3c0cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.8198e-019.47e-14
2o88A/T0492-2o88A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2o88A/T0492-2o88A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.3990e-014.08e-12
1e0cA/T0492-1e0cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e0cA/T0492-1e0cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8839e-018.99e-07 1e0cA c.46.1.2
c.46.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001