Best Alignments for T0492

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2h3jA/T0492-2h3jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h3jA/T0492-2h3jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2632e-093.62e-26
2gcxA/T0492-2gcxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gcxA/T0492-2gcxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5632e-097.95e-26
1fx7A/T0492-1fx7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fx7A/T0492-1fx7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6321e-041.13e-16 1bi0 a.4.5.24
a.76.1.1
b.34.1.2
2qq9A/T0492-2qq9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qq9A/T0492-2qq9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.4047e-021.81e-07
1zx6A/T0492-1zx6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zx6A/T0492-1zx6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0201e-013.93e-14
1aboA/T0492-1aboA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aboA/T0492-1aboA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0307e-019.05e-14 1bbzA b.34.2.1
3c0cA/T0492-3c0cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3c0cA/T0492-3c0cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1574e-019.47e-14
1gcqA/T0492-1gcqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gcqA/T0492-1gcqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3964e-011.02e-13 1ckaA b.34.2.1
1qw1A/T0492-1qw1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qw1A/T0492-1qw1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6298e-013.42e-05
2g6fX/T0492-2g6fX-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g6fX/T0492-2g6fX-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2238e-014.59e-15

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001