# TARGET T0492 # Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net # This is a 4-layer network, with # window units # 5 15 # 7 15 # 9 15 # 13 6 (1 EBGHTL ) # The input amino acid frequencies were determined from # alignment T0492.t2k-thin90.a2m.gz # with weighted counts, using HenikoffWeight(-1 bits/column, 1) # Counts were regularized to probabilities using # /projects/compbio/lib/recode3.20comp # Total sequence weight for alignment was 347 # Pos AA E B G H T C 10N 1S 5N 5N 5N 5N 5N 5N 1 M 0.021 0.004 0.001 0.004 0.172 0.797 2 F 0.152 0.112 0.003 0.020 0.088 0.624 3 S 0.253 0.053 0.012 0.041 0.124 0.517 4 L 0.070 0.009 0.507 0.091 0.197 0.126 5 R 0.046 0.014 0.559 0.064 0.199 0.118 6 D 0.046 0.014 0.489 0.046 0.275 0.130 7 A 0.038 0.060 0.052 0.038 0.337 0.475 8 K 0.012 0.034 0.005 0.005 0.827 0.116 9 C 0.010 0.008 0.018 0.005 0.900 0.060 10 G 0.017 0.001 0.008 0.001 0.922 0.051 11 Q 0.442 0.031 0.003 0.001 0.469 0.054 12 T 0.866 0.011 0.001 0.001 0.017 0.105 13 V 0.970 0.003 0.001 0.001 0.005 0.022 14 K 0.983 0.001 0.001 0.001 0.004 0.013 15 V 0.986 0.002 0.001 0.001 0.003 0.009 16 V 0.967 0.001 0.001 0.001 0.008 0.024 17 K 0.957 0.001 0.001 0.001 0.012 0.029 18 L 0.914 0.009 0.001 0.001 0.020 0.056 19 H 0.523 0.020 0.004 0.002 0.247 0.204 20 G 0.038 0.005 0.022 0.009 0.588 0.337 21 T 0.007 0.005 0.026 0.035 0.609 0.318 22 G 0.001 0.001 0.064 0.595 0.278 0.061 23 A 0.002 0.001 0.017 0.894 0.049 0.036 24 L 0.001 0.001 0.005 0.987 0.005 0.002 25 K 0.001 0.001 0.004 0.989 0.004 0.001 26 R 0.001 0.001 0.003 0.991 0.004 0.001 27 R 0.002 0.001 0.004 0.988 0.005 0.001 28 I 0.002 0.001 0.004 0.984 0.008 0.002 29 M 0.001 0.001 0.010 0.976 0.010 0.003 30 D 0.002 0.001 0.013 0.945 0.023 0.016 31 M 0.005 0.001 0.015 0.839 0.048 0.093 32 G 0.016 0.001 0.003 0.022 0.115 0.843 33 I 0.106 0.037 0.004 0.007 0.150 0.696 34 T 0.169 0.075 0.003 0.003 0.718 0.031 35 R 0.048 0.004 0.005 0.001 0.923 0.019 36 G 0.042 0.001 0.001 0.001 0.923 0.034 37 C 0.778 0.008 0.001 0.001 0.193 0.020 38 E 0.971 0.006 0.001 0.001 0.002 0.021 39 I 0.990 0.001 0.001 0.001 0.001 0.008 40 Y 0.993 0.001 0.001 0.001 0.001 0.006 41 I 0.993 0.001 0.001 0.001 0.001 0.005 42 R 0.969 0.001 0.001 0.001 0.006 0.025 43 K 0.929 0.002 0.001 0.001 0.014 0.054 44 V 0.765 0.015 0.001 0.001 0.036 0.182 45 A 0.383 0.029 0.005 0.001 0.219 0.364 46 P 0.107 0.006 0.009 0.001 0.583 0.293 47 L 0.043 0.012 0.021 0.003 0.743 0.178 48 G 0.066 0.020 0.015 0.003 0.664 0.232 49 D 0.244 0.030 0.009 0.002 0.449 0.265 50 P 0.322 0.005 0.009 0.003 0.178 0.484 51 I 0.894 0.009 0.004 0.001 0.030 0.061 52 Q 0.982 0.002 0.001 0.001 0.006 0.009 53 I 0.992 0.001 0.001 0.001 0.003 0.005 54 N 0.989 0.001 0.001 0.001 0.004 0.005 55 V 0.971 0.002 0.001 0.001 0.016 0.011 56 R 0.345 0.001 0.009 0.022 0.554 0.069 57 G 0.128 0.002 0.023 0.101 0.678 0.069 58 Y 0.627 0.014 0.011 0.091 0.200 0.056 59 E 0.869 0.013 0.005 0.051 0.031 0.032 60 L 0.951 0.003 0.002 0.012 0.007 0.026 61 S 0.964 0.005 0.004 0.007 0.008 0.012 62 L 0.883 0.006 0.009 0.013 0.032 0.058 63 R 0.545 0.005 0.006 0.037 0.142 0.265 64 K 0.070 0.001 0.135 0.536 0.207 0.051 65 S 0.063 0.004 0.185 0.498 0.226 0.024 66 A 0.070 0.004 0.235 0.422 0.242 0.028 67 A 0.147 0.008 0.222 0.370 0.169 0.084 68 E 0.293 0.018 0.130 0.248 0.179 0.132 69 M 0.445 0.004 0.052 0.112 0.136 0.252 70 I 0.547 0.004 0.009 0.042 0.064 0.334 71 E 0.627 0.030 0.003 0.028 0.046 0.266 72 V 0.378 0.025 0.002 0.023 0.039 0.533 73 E 0.011 0.002 0.001 0.002 0.020 0.964