Best Alignments for T0492

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2h3jA	2.7182e-10	2h3jA/T0492-2h3jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gcxA	3.3647e-10	2gcxA/T0492-2gcxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fx7A	1.5217e-03	1fx7A/T0492-1fx7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
1qw1A	3.5692e-03	1qw1A/T0492-1qw1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dtrA	6.6109e-03	2dtrA/T0492-2dtrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2qq9A	1.3314e-02	2qq9A/T0492-2qq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dtr	1.8427e+00	2dtr/T0492-2dtr-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bymA	1.0294e+01	1bymA/T0492-1bymA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.1.2
1y8xB	1.7230e+01	1y8xB/T0492-1y8xB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rhsA	2.2788e+01	1rhsA/T0492-1rhsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1rhs	2.3892e+01	1rhs/T0492-1rhs-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bi0	2.5412e+01	1bi0/T0492-1bi0-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1e0cA	3.4885e+01	1e0cA/T0492-1e0cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1uarA	3.4960e+01	1uarA/T0492-1uarA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1h75A	3.5234e+01	1h75A/T0492-1h75A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.1
1j48A	4.6056e+01	1j48A/T0492-1j48A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.7.1
2c81A	4.6210e+01	2c81A/T0492-2c81A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cbfA	4.9749e+01	1cbfA/T0492-1cbfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.90.1.1
1va0A	5.5177e+01	1va0A/T0492-1va0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.90.1.1
1vekA	5.5186e+01	1vekA/T0492-1vekA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.5.2.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001