Best Alignments for T0492

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2gcxA	8.4443e-11	2gcxA/T0492-2gcxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2h3jA	1.0028e-10	2h3jA/T0492-2h3jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fx7A	6.8031e-04	1fx7A/T0492-1fx7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2qq9A	5.8152e-03	2qq9A/T0492-2qq9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dtrA	1.0685e-02	2dtrA/T0492-2dtrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2dtr	1.7161e-02	2dtr/T0492-2dtr-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bi0	4.2815e-02	1bi0/T0492-1bi0-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qw1A	6.1600e-02	1qw1A/T0492-1qw1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bymA	1.5005e+00	1bymA/T0492-1bymA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.1.2
1h9fA	1.6638e+01	1h9fA/T0492-1h9fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.140.1.1
1jeiA	1.9139e+01	1jeiA/T0492-1jeiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.140.1.1
1va0A	2.0703e+01	1va0A/T0492-1va0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.90.1.1
1y8xB	2.1275e+01	1y8xB/T0492-1y8xB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pjzA	2.4914e+01	1pjzA/T0492-1pjzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.36
1gjjA	2.6488e+01	1gjjA/T0492-1gjjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.140.1.1 a.140.1.1
2c81A	4.7499e+01	2c81A/T0492-2c81A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cbtA	5.2695e+01	3cbtA/T0492-3cbtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1eejA	5.9505e+01	1eejA/T0492-1eejA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.9 d.17.3.1
2r6hA	6.0652e+01	2r6hA/T0492-2r6hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2eixA	6.1768e+01	2eixA/T0492-2eixA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001